#sample=>id=pgxbs-kftvksk1;biosample_id=pgxbs-kftvksk1;individual_id=pgxind-kftx6ydu;biosample_name=CELLLINE_CCLE_BROAD-HEC50B_ENDOMETRIUM;notes=Endometrial adenocarcinoma [cell line HEC-50B];histological_diagnosis_id=NCIT:C7359;histological_diagnosis_label=Endometrial adenocarcinoma;pathological_stage_id=NCIT:C92207;pathological_stage_label=Stage Unknown;biosample_status_id=EFO:0030035;biosample_status_label=cancer cell line sample;sample_origin_type_id=OBI:0001876;sample_origin_type_label=cell culture;sampled_tissue_id=UBERON:0001295;sampled_tissue_label=endometrium;age_iso=P69Y;icdo_morphology_id=pgx:icdom-81403;icdo_morphology_label=Adenocarcinoma, NOS;icdo_topography_id=pgx:icdot-C54.1;icdo_topography_label=Endometrium;pubmed_id=pubmed:22460905;pubmed_label=Barretina J, Caponigro G et al. (2012): The Cancer Cell Line Encyclopedia enables...;cellosaurus_id=cellosaurus:CVCL_2929;cellosaurus_label=HEC-50B;cbioportal_id=cbioportal:cellline_ccle_broad;cohorts=pgx:cohort-2021progenetix::Version at Progenetix Update 2021&&pgx:cohort-celllines::Cancer cell lines;geoprov_city=Cambridge;geoprov_country=United States of America;geoprov_iso_alpha3=USA;geoprov_long_lat=-71.11::42.38
biosample_id	reference_name	start	end	log2	variant_type	reference_sequence	sequence	variant_state_id	variant_state_label
pgxbs-kftvksk1	1	16041908	16863509	-0.8572	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvksk1	1	16864367	18758311	-1.069	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvksk1	1	106732655	149844893	0.3835	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	1	152583230	152614118	-2.2367	DEL	.	.	EFO:0020073	high-level copy number loss
pgxbs-kftvksk1	1	185576032	192998962	0.3951	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	1	193000595	232436715	0.4134	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	1	232436749	233165754	0.4228	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	1	233171586	246414387	0.3848	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	1	246415836	248930189	0.3432	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	2	12784	4468081	0.41	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	2	106270799	204729922	0.4141	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	2	204736511	242147305	0.3708	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	3	116239231	116289731	-1.0219	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvksk1	3	116293546	116432135	-3.7661	DEL	.	.	EFO:0020073	high-level copy number loss
pgxbs-kftvksk1	3	116433009	116594557	-0.8509	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvksk1	3	116594690	117365578	-5.0461	DEL	.	.	EFO:0020073	high-level copy number loss
pgxbs-kftvksk1	3	117366829	117484438	-1.0536	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvksk1	3	168305429	189642965	0.3903	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	3	189645889	189646849	-2.6635	DEL	.	.	EFO:0020073	high-level copy number loss
pgxbs-kftvksk1	3	189653199	193165114	0.4278	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	3	193168646	198169247	0.4946	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	4	180941870	189654290	-1.0591	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvksk1	5	15532	21072830	0.4284	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	5	131948917	140707425	0.3587	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	5	140709408	155863201	0.3747	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	5	155864803	161722144	0.3895	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	5	161723522	181363319	0.5037	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	6	140835696	158056442	0.4511	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	6	162240013	170741917	0.39	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	7	103408950	107416167	0.4139	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	7	107420881	111142940	0.4082	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	7	111147727	142069843	0.4406	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	7	142090403	142700120	0.4419	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	7	142702603	142843261	-1.1932	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvksk1	7	142853194	159334314	0.4066	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	8	46000692	49406152	-0.9129	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvksk1	8	49415749	50131959	-4.3348	DEL	.	.	EFO:0020073	high-level copy number loss
pgxbs-kftvksk1	8	50131976	52159276	-4.6903	DEL	.	.	EFO:0020073	high-level copy number loss
pgxbs-kftvksk1	8	52163827	56816358	0.5123	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	8	56835567	57463114	-4.7953	DEL	.	.	EFO:0020073	high-level copy number loss
pgxbs-kftvksk1	8	57465687	58886376	-5.0113	DEL	.	.	EFO:0020073	high-level copy number loss
pgxbs-kftvksk1	8	59468135	130817017	0.7639	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	8	130818751	145072769	0.3487	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	9	5368980	6524148	-1.0769	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvksk1	9	6525753	9431811	-1.2938	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvksk1	9	9432824	9824140	-4.7864	DEL	.	.	EFO:0020073	high-level copy number loss
pgxbs-kftvksk1	9	9824156	9986152	-5.0471	DEL	.	.	EFO:0020073	high-level copy number loss
pgxbs-kftvksk1	9	9988418	21819478	-1.0126	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvksk1	9	21828111	22005318	-4.445	DEL	.	.	EFO:0020073	high-level copy number loss
pgxbs-kftvksk1	9	22005331	22019733	-5.5373	DEL	.	.	EFO:0020073	high-level copy number loss
pgxbs-kftvksk1	9	22020524	28256467	-1.0121	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvksk1	9	28257663	28795743	-4.7674	DEL	.	.	EFO:0020073	high-level copy number loss
pgxbs-kftvksk1	9	28796457	30953784	-0.9964	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvksk1	11	31345394	34510378	0.8822	DUP	.	.	EFO:0030072	high-level copy number gain
pgxbs-kftvksk1	11	55648927	115406297	0.4369	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	11	115408818	119055223	0.3724	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	12	11320628	11330013	-4.6011	DEL	.	.	EFO:0020073	high-level copy number loss
pgxbs-kftvksk1	12	24500303	27819969	0.5196	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	12	30485383	34064565	0.6959	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	12	98900721	99119060	-1.0236	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvksk1	12	99119907	99232775	-4.9219	DEL	.	.	EFO:0020073	high-level copy number loss
pgxbs-kftvksk1	12	99237441	99401515	-1.0063	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvksk1	12	99401690	99544997	-1.0044	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvksk1	13	57184155	57204246	2.4392	DUP	.	.	EFO:0030072	high-level copy number gain
pgxbs-kftvksk1	14	105757523	106577527	0.6245	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	16	108342	14895982	0.7678	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	16	14954911	20785065	0.7521	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	16	55762477	78362100	0.358	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	16	78364754	78549360	-5.5884	DEL	.	.	EFO:0020073	high-level copy number loss
pgxbs-kftvksk1	16	78549537	78695727	-1.0051	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvksk1	17	36109735	36157718	-1.0363	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvksk1	17	44055242	83091522	0.4205	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	18	33302068	33462976	-3.9869	DEL	.	.	EFO:0020073	high-level copy number loss
pgxbs-kftvksk1	18	33465012	33505710	-5.9935	DEL	.	.	EFO:0020073	high-level copy number loss
pgxbs-kftvksk1	18	33537508	40685425	-0.9828	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvksk1	18	40688060	42476672	-0.9682	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvksk1	18	42476692	80257174	-1.0501	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvksk1	19	48686158	48702888	-4.0773	DEL	.	.	EFO:0020073	high-level copy number loss
pgxbs-kftvksk1	20	30245164	45283387	0.3821	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	20	45283861	50918932	0.7401	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	20	50923437	64324800	0.7542	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	21	13188389	23061396	0.4308	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	21	23061642	26427082	0.3725	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	21	26441085	27382347	0.4432	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvksk1	21	27386398	34656826	0.4071	DUP	.	.	EFO:0030071	low-level copy number gain