#sample=>id=pgxbs-kftvimfk;biosample_id=pgxbs-kftvimfk;individual_id=pgxind-kftx4blo;biosample_name=GSM186492;notes=malignant melanoma [cell line WM47];histological_diagnosis_id=NCIT:C3510;histological_diagnosis_label=Cutaneous Melanoma;pathological_stage_id=NCIT:C92207;pathological_stage_label=Stage Unknown;biosample_status_id=EFO:0030035;biosample_status_label=cancer cell line sample;sample_origin_type_id=OBI:0001876;sample_origin_type_label=cell culture;sampled_tissue_id=UBERON:0000014;sampled_tissue_label=zone of skin;icdo_morphology_id=pgx:icdom-87203;icdo_morphology_label=Malignant melanoma, NOS;icdo_topography_id=pgx:icdot-C44.9;icdo_topography_label=Skin, NOS;pubmed_id=pubmed:17440070;pubmed_label=Greshock J, Nathanson K et al. (2007): Cancer cell lines as genetic models...;cellosaurus_id=cellosaurus:CVCL_C280;cellosaurus_label=WM47;cohorts=pgx:cohort-arraymap::arrayMap collection&&pgx:cohort-2021progenetix::Version at Progenetix Update 2021&&pgx:cohort-celllines::Cancer cell lines&&pgx:cohort-carriocordo2021heterogeneity::Carrio-Cordo and Baudis - Genomic Heterogeneity in Cancer Types (2021);geoprov_city=King of Prussia;geoprov_country=United States of America;geoprov_iso_alpha3=USA;geoprov_long_lat=-75.4::40.09
biosample_id	reference_name	start	end	log2	variant_type	reference_sequence	sequence	variant_state_id	variant_state_label
pgxbs-kftvimfk	1	1106762	80773102	0.228	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvimfk	1	171142703	248626384	0.1142	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvimfk	3	62557098	70278225	0.8375	DUP	.	.	EFO:0030072	high-level copy number gain
pgxbs-kftvimfk	3	71305035	196746173	0.2049	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvimfk	4	349410	48697739	-0.2785	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvimfk	5	20648039	31942718	0.134	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvimfk	7	113947	15228293	0.4175	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvimfk	7	15723876	49744021	0.5854	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvimfk	7	50022587	55561504	0.4097	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvimfk	7	55999567	56063828	-0.5253	DEL	.	.	EFO:0020073	high-level copy number loss
pgxbs-kftvimfk	7	56222978	68731034	0.3643	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvimfk	7	68975013	158893158	0.4736	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvimfk	10	153552	8075011	-0.4115	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvimfk	10	20272343	32034286	-0.3983	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvimfk	11	57201508	134444921	-0.277	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvimfk	13	19371849	114254269	-0.3642	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvimfk	14	20291830	86961446	0.1511	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvimfk	14	88135855	99269631	0.296	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvimfk	14	100842412	105354334	0.1	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvimfk	15	22829630	101473069	0.111	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvimfk	18	721453	79057272	0.1746	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvimfk	20	5893724	64247041	0.2422	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvimfk	22	15811195	49781377	0.183	DUP	.	.	EFO:0030071	low-level copy number gain