#sample=>id=pgxbs-kftvieer;biosample_id=pgxbs-kftvieer;individual_id=pgxind-kftx423n;biosample_name=GSM434333;notes=bronchioalveolar carcinoma [cell line NCI-H322];histological_diagnosis_id=NCIT:C7270;histological_diagnosis_label=Mixed Mucinous and Non-Mucinous Bronchioloalveolar Carcinoma;pathological_stage_id=NCIT:C92207;pathological_stage_label=Stage Unknown;biosample_status_id=EFO:0030035;biosample_status_label=cancer cell line sample;sample_origin_type_id=OBI:0001876;sample_origin_type_label=cell culture;sampled_tissue_id=UBERON:0002048;sampled_tissue_label=lung;icdo_morphology_id=pgx:icdom-82543;icdo_morphology_label=Bronchiolo-alveolar carcinoma, mixed mucinous and non-mucinous;icdo_topography_id=pgx:icdot-C34.9;icdo_topography_label=Lung, NOS;pubmed_id=pubmed:19451690;pubmed_label=Sos ML, Michel K et al. (2009): Predicting drug susceptibility of non-small cell...;cellosaurus_id=cellosaurus:CVCL_1556;cellosaurus_label=NCI-H322;cohorts=pgx:cohort-arraymap::arrayMap collection&&pgx:cohort-gao2021signatures::Gao and Baudis - Cancer CNV Signatures (2021)&&pgx:cohort-2021progenetix::Version at Progenetix Update 2021&&pgx:cohort-celllines::Cancer cell lines;geoprov_city=Koeln;geoprov_country=Germany;geoprov_iso_alpha3=DEU;geoprov_long_lat=6.95::50.93
biosample_id	reference_name	start	end	log2	variant_type	reference_sequence	sequence	variant_state_id	variant_state_label
pgxbs-kftvieer	1	30672545	30759429	0.4204	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	1	143545399	143735234	-0.6674	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvieer	1	143760294	248874237	0.2304	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	2	12994	90144630	0.2541	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	2	94693073	94754549	0.2541	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	3	60391809	60611268	-0.6385	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvieer	3	195400343	195749214	-0.7723	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvieer	3	195751990	198073373	0.3109	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	4	36567	31453218	0.4048	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	4	33315752	33912446	0.6646	DUP	.	.	EFO:0030072	high-level copy number gain
pgxbs-kftvieer	4	42933155	44783982	0.4023	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	4	46992478	49047084	0.4663	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	4	61826721	61841935	-1.292	DEL	.	.	EFO:0020073	high-level copy number loss
pgxbs-kftvieer	4	150524639	150743286	-1.1391	DEL	.	.	EFO:0020073	high-level copy number loss
pgxbs-kftvieer	4	160489715	160508239	-1.2736	DEL	.	.	EFO:0020073	high-level copy number loss
pgxbs-kftvieer	6	101971438	102026664	-1.5661	DEL	.	.	EFO:0020073	high-level copy number loss
pgxbs-kftvieer	6	164870086	164914228	-1.7476	DEL	.	.	EFO:0020073	high-level copy number loss
pgxbs-kftvieer	7	50257	20179532	0.4142	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	7	20822683	57770694	0.33	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	7	62058222	68265572	0.8576	DUP	.	.	EFO:0030072	high-level copy number gain
pgxbs-kftvieer	7	68288122	73615549	0.4899	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	7	73643220	76713262	-0.6145	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvieer	7	76817005	79003692	-0.5412	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvieer	7	79012593	80668857	0.4188	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	7	82033959	82169386	0.3587	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	7	82201147	91049822	-0.6226	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvieer	7	91065764	91596584	0.4005	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	7	91643164	93248504	0.6716	DUP	.	.	EFO:0030072	high-level copy number gain
pgxbs-kftvieer	7	98052132	98684122	0.5257	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	7	98687492	99040832	1.2257	DUP	.	.	EFO:0030072	high-level copy number gain
pgxbs-kftvieer	7	99043541	99632145	0.6671	DUP	.	.	EFO:0030072	high-level copy number gain
pgxbs-kftvieer	7	99662469	101915619	-0.5846	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvieer	7	101948758	102274376	0.5871	DUP	.	.	EFO:0030072	high-level copy number gain
pgxbs-kftvieer	7	102331500	159334084	-0.5978	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvieer	8	249547	41368570	-0.6028	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvieer	8	83072390	107129355	0.2388	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	8	114679870	145068028	0.3381	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	9	20263188	22136490	-1.85	DEL	.	.	EFO:0020073	high-level copy number loss
pgxbs-kftvieer	9	135499453	136093588	0.4581	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	9	136806656	138068271	0.4381	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	10	66015	12373149	-0.5843	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvieer	10	105743983	108841993	0.318	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	10	108948067	133621047	0.3068	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	11	11169863	17492845	0.4784	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	11	32077207	33483948	0.4614	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	11	46643511	48106637	0.5131	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	11	48408848	49752662	0.3766	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	11	55677818	57444173	-0.56	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvieer	11	57503036	57866721	0.8823	DUP	.	.	EFO:0030072	high-level copy number gain
pgxbs-kftvieer	11	57874411	60359925	-0.5251	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvieer	11	60398982	80462855	0.2853	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	11	80502926	80718107	-0.7342	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvieer	11	80744726	81288503	0.2287	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	11	81297312	81426438	-0.6893	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvieer	11	81440859	83257122	0.3161	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	11	83260227	83337512	-0.6751	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvieer	11	83351486	83493411	0.2248	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	11	83525193	83798730	-0.6537	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvieer	11	83815181	84950637	0.2509	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	11	84950786	85460777	-0.6687	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvieer	11	85477480	86833562	0.2604	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	11	87054028	93337869	0.2908	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	11	93346534	93690071	-0.5981	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvieer	11	93780364	106188190	0.2947	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	11	106221572	106250548	0.9644	DUP	.	.	EFO:0030072	high-level copy number gain
pgxbs-kftvieer	11	106260108	106608796	0.3843	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	11	106609235	106698857	-0.5971	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvieer	11	106734084	135074876	0.2725	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	12	13164774	13271995	0.7159	DUP	.	.	EFO:0030072	high-level copy number gain
pgxbs-kftvieer	12	13296021	14218994	0.2498	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	12	14230578	28020739	0.6955	DUP	.	.	EFO:0030072	high-level copy number gain
pgxbs-kftvieer	12	28021884	28084798	1.4033	DUP	.	.	EFO:0030072	high-level copy number gain
pgxbs-kftvieer	12	28089760	28119368	0.4409	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	12	28140470	29640207	1.3296	DUP	.	.	EFO:0030072	high-level copy number gain
pgxbs-kftvieer	12	29665271	34607396	0.6206	DUP	.	.	EFO:0030072	high-level copy number gain
pgxbs-kftvieer	12	37497072	41904330	0.6206	DUP	.	.	EFO:0030072	high-level copy number gain
pgxbs-kftvieer	13	45101874	45208177	0.6008	DUP	.	.	EFO:0030072	high-level copy number gain
pgxbs-kftvieer	14	19734966	105633493	0.2092	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	14	106009834	106838890	0.2092	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	15	19981155	20994922	0.3574	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	15	21252928	25474995	0.3574	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	15	45570254	59431054	-0.5319	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvieer	15	59431066	82271650	0.5543	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	15	83492892	84786327	0.489	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	15	91758068	101853034	0.3915	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	16	71401347	90090367	0.2464	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	17	157097	290146	-0.5094	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvieer	17	3939197	4162929	0.2878	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	17	13256013	22646179	0.3294	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	17	27016345	27331289	0.3294	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	20	167044	3580008	-0.5601	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvieer	20	13261519	13364682	-0.6942	DEL	.	.	EFO:0030068	low-level copy number loss
pgxbs-kftvieer	20	34408295	35280121	0.8214	DUP	.	.	EFO:0030072	high-level copy number gain
pgxbs-kftvieer	20	35283858	35913170	1.4889	DUP	.	.	EFO:0030072	high-level copy number gain
pgxbs-kftvieer	20	35913229	35990302	2.3582	DUP	.	.	EFO:0030072	high-level copy number gain
pgxbs-kftvieer	20	36019079	41080615	0.7942	DUP	.	.	EFO:0030072	high-level copy number gain
pgxbs-kftvieer	20	41141335	64272376	0.39	DUP	.	.	EFO:0030071	low-level copy number gain
pgxbs-kftvieer	22	16906755	20970019	0.3032	DUP	.	.	EFO:0030071	low-level copy number gain